• Research demonstrates that cells with ca

    From ScienceDaily@1:317/3 to All on Mon Dec 13 21:30:44 2021
    Research demonstrates that cells with cancer-associated mutations
    overtake human tissue with age

    Date:
    December 13, 2021
    Source:
    University of Colorado Anschutz Medical Campus
    Summary:
    Recently published research has found that most cancer-free
    individuals over age 60 carry at least 100 billion cells harboring
    at least one oncogenic, or tumor-causing, mutation.



    FULL STORY ==========================================================================
    It's worth noting, in light of recently published research,
    that a majority of people won't be diagnosed with cancer in their
    lifetimes. According to the National Cancer Institute, about 40% of
    people will, which means 60% won't.


    ========================================================================== These percentages are worth remembering because research conducted by University of Colorado Cancer Center Deputy Director James DeGregori,
    PhD, a professor of biochemistry and molecular genetics, and Edward
    J. Evans, PhD, a postdoctoral fellow in the Department of Biochemistry
    and Molecular Genetics, found that most cancer-free individuals over age
    60 carry at least 100 billion cells harboring at least one oncogenic,
    or tumor-causing, mutation.

    The research, published in Aging and Cancer, involved a meta-analysis of previously published sequencing data on normal tissues, which DeGregori
    and Evans used to categorize somatic mutations, or mutations that occur
    after egg fertilization, based on their presence in cancer and showcase
    the quantity of cells with cancer-associated mutations in cancer-free individuals.

    "When you have trillions of cells and they're being maintained for
    up to a century, they're going to accumulate mutations," DeGregori
    explains. "The fact that we get mutations is not surprising, just based
    on known mutation rates.

    One thing this research points to is that we need to start looking
    at these mutations, and how or whether they cause cancer, from a
    different light." Gathering data to associate mutations with cancer
    "To understand the genesis of cancer, we need to look at normal tissue,"
    Evans says. "By the time it's developed into cancer, all the mutations
    are there and we don't always know which ones are contributing to the
    actual genesis of cancer.



    ==========================================================================
    "We had the idea that a lot of the mutations in people would be oncogenic
    or associated with cancer, but we just didn't know how many. We figured
    that it would increase as people get older, but we didn't necessarily
    know which genes would be prevalent and we didn't know the magnitude
    of how many cells could actually have these oncogenic mutations."
    After reviewing existing literature, Evans collected datasets from
    researchers who previously had conducted research on mutations in normal tissue. He taught himself to code in the programming language Python so
    that he could pull appropriate data and create data frames to categorize mutations by the genes, tissue, and age of individuals in which they
    were occurring, among other factors.

    "We have about three trillion nucleated cells in our bodies, so to put
    it in perspective, 100 billion cells with oncogenic mutations isn't
    a majority of our total number of cells," Evans says. "But that's a surprisingly high number considering that it only takes one cell to
    cause cancer. If there are billions of cells with these mutations but no indication of cancer, what does that mean? What does it mean to have
    these oncogenic mutations in the body?" Understanding differences
    between tissue types One of the interesting facets of the research
    findings, DeGregori says, has been learning that oncogenic mutations
    can be extremely prevalent in certain types of tissue, including skin,
    colon, and esophagus.



    ========================================================================== "Some tissues can be absolutely dominated by these mutations," DeGregori
    says.

    "But if you look at the esophagus, for example, half of it is loaded with NOTCH1 mutations, which rarely contribute to cancer in non-smokers. So,
    to test for this mutation isn't really useful if most of us have it and
    it rarely leads to cancer.

    "If we're simply looking for oncogenic mutations, we're always going
    to find them and they may not tell us much about cancer risk. How those oncogenic mutations are interfacing with the tissue environment will tell
    us so much more about risk." A further avenue of research, DeGregori
    says, will be studying why some tissues have such a high occurrence of oncogenic mutations but a comparatively low occurrence of cancer, while
    other types of tissue have a relatively low level of oncogenic mutations.

    "Before we began this research, I had no idea that almost 90% of
    colon cells become occupied with cancer-causing mutations," DeGregori
    said. "That the number was so high was quite surprising, but a relatively
    low percentage of us will get colon cancer. So, it's going to be important
    to study this difference between tissue types. Why is it that epithelial
    tissue in the skin, for example, becomes dominated by oncogenic variants,
    but lung tissue actually keeps a fairly low level?" Evans says future
    research could continue studying which oncogenic mutations are most
    likely to contribute to cancer and help to hone genetic screening tools
    to test for the most cancer-causing mutations.

    "The vast majority of mutations don't do anything, they don't
    cause any problems, and many aren't even in coding sequences,"
    DeGregori explains. "Every cell in our bodies has dozens and
    dozens of mutations, if not hundreds or thousands, so we have an
    opportunity to begin asking whether these patterns of mutations
    that we see can dictate whether someone is at high risk of cancer." ========================================================================== Story Source: Materials provided by University_of_Colorado_Anschutz_Medical_Campus. Original written by
    Rachel Sauer. Note: Content may be edited for style and length.


    ========================================================================== Journal Reference:
    1. Edward J. Evans, James DeGregori. Cells with cancer‐associated
    mutations overtake our tissues as we age. Aging and Cancer, 2021;
    2 (3): 82 DOI: 10.1002/aac2.12037 ==========================================================================

    Link to news story: https://www.sciencedaily.com/releases/2021/12/211213133339.htm

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