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-- Found FLEX: /usr/bin/flex (found version "2.6.4")
-- Configuring done (3.7s)
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progs/Proglib -I/build/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-2.3.00+
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progs/Proglib -I/build/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-2.3.00+
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progs/Proglib -I/build/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-2.3.00+
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cd /build/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-2.3.00+dfsg/
progs/Proglib -I/build/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-2.3.00+
dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/mincexample1.dir/mincexample/mincexample1.c.o -MF CMakeFiles/
mincexample1.dir/mincexample/mincexample1.c.o.d -o CMakeFiles/mincexample1.dir/mincexample/mincexample1.c.o -c /build/minc-tools-2.3.00+dfsg/progs/mincexample/mincexample1.c
cd /build/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-2.3.00+dfsg/
progs/Proglib -I/build/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-2.3.00+
dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/mincconvert.dir/mincconvert/mincconvert.c.o -MF CMakeFiles/
mincconvert.dir/mincconvert/mincconvert.c.o.d -o CMakeFiles/mincconvert.dir/mincconvert/mincconvert.c.o -c /build/minc-tools-2.3.00+dfsg/progs/mincconvert/mincconvert.c
make[3]: Entering directory '/build/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu'
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cd /build/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-2.3.00+dfsg/
progs/Proglib -I/build/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-2.3.00+
dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/mincexample2.dir/mincexample/mincexample2.c.o -MF CMakeFiles/
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/build/minc-tools-2.3.00+dfsg/progs/mincdump/mincdump.c: In function 'do_ncdump':
cd /build/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/minc-tools-2.3.00+dfsg /build/minc-tools-2.3.00+dfsg/progs /build/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu /build/minc-tools-2.3.00+dfsg/
obj-x86_64-linux-gnu/progs /build/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/CMakeFiles/minccalc.dir/DependInfo.cmake "--color="
/build/minc-tools-2.3.00+dfsg/progs/mincdump/mincdump.c:481:49: error: '_FillValue' undeclared (first use in this function); did you mean 'NC_FillValue'?
481 | nc_status = ncattinq(ncid,varid,_FillValue,&att.type,&att.len);
| ^~~~~~~~~~
| NC_FillValue /build/minc-tools-2.3.00+dfsg/progs/mincdump/mincdump.c:481:49: note: each undeclared identifier is reported only once for each function it appears in
make[3]: *** [progs/CMakeFiles/mincdump.dir/build.make:82: progs/CMakeFiles/mincdump.dir/mincdump/mincdump.c.o] Error 1
make[3]: *** Waiting for unfinished jobs....
make -f progs/CMakeFiles/mincexpand.dir/build.make progs/CMakeFiles/mincexpand.dir/depend
make[3]: Leaving directory '/build/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 11%] Linking C executable invert_raw_image
cd /build/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cmake -E cmake_link_script CMakeFiles/invert_raw_image.dir/link.txt --verbose=1
make -f progs/CMakeFiles/minccalc.dir/build.make progs/CMakeFiles/minccalc.dir/build
make[3]: Entering directory '/build/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu'
cd /build/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/minc-tools-2.3.00+dfsg /build/minc-tools-2.3.00+dfsg/progs /build/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu /build/minc-tools-2.3.00+dfsg/
obj-x86_64-linux-gnu/progs /build/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/CMakeFiles/mincexpand.dir/DependInfo.cmake "--color="
cd /build/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/minc-tools-2.3.00+dfsg /build/minc-tools-2.3.00+dfsg/progs /build/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu /build/minc-tools-2.3.00+dfsg/
obj-x86_64-linux-gnu/progs /build/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/CMakeFiles/mincgen.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/build/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu'
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cd /build/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cmake -E cmake_link_script CMakeFiles/mincconvert.dir/link.txt --verbose=1
make[3]: Leaving directory '/build/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make -f progs/CMakeFiles/mincexpand.dir/build.make progs/CMakeFiles/mincexpand.dir/build
make[3]: Leaving directory '/build/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu'
make -f progs/CMakeFiles/mincgen.dir/build.make progs/CMakeFiles/mincgen.dir/build
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cd /build/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-2.3.00+dfsg/
progs/Proglib -I/build/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-2.3.00+
dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/minccalc.dir/minccalc/minccalc.c.o -MF CMakeFiles/minccalc.dir/
minccalc/minccalc.c.o.d -o CMakeFiles/minccalc.dir/minccalc/minccalc.c.o -c /build/minc-tools-2.3.00+dfsg/progs/minccalc/minccalc.c
cd /build/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-2.3.00+dfsg/
progs/Proglib -I/build/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-2.3.00+
dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/mincexpand.dir/mincexpand/mincexpand.c.o -MF CMakeFiles/
mincexpand.dir/mincexpand/mincexpand.c.o.d -o CMakeFiles/mincexpand.dir/mincexpand/mincexpand.c.o -c /build/minc-tools-2.3.00+dfsg/progs/mincexpand/mincexpand.c
make[3]: Entering directory '/build/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu'
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progs/Proglib -I/build/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-2.3.00+
dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/mincgen.dir/mincgen/main.c.o -MF CMakeFiles/mincgen.dir/mincgen/
main.c.o.d -o CMakeFiles/mincgen.dir/mincgen/main.c.o -c /build/minc-tools-2.3.00+dfsg/progs/mincgen/main.c
/usr/bin/ld: warning: libnetcdf.so.19, needed by /usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu/libminc2.so, may conflict with libnetcdf.so.22
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cd /build/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cmake -E cmake_link_script CMakeFiles/mincexample2.dir/link.txt --verbose=1
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cd /build/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cmake -E cmake_link_script CMakeFiles/mincexample1.dir/link.txt --verbose=1
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/usr/bin/ld: warning: libnetcdf.so.19, needed by /usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu/libminc2.so, may conflict with libnetcdf.so.22
/usr/bin/ld: warning: libnetcdf.so.19, needed by /usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu/libminc2.so, may conflict with libnetcdf.so.22
/usr/bin/ld: warning: libnetcdf.so.19, needed by /usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu/libminc2.so, may conflict with libnetcdf.so.22
/usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/
hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -rdynamic -Wl,--dependency-file=CMakeFiles/mincconvert.dir/link.d CMakeFiles/mincconvert.dir/mincconvert/mincconvert.c.o -o mincconvert -L/usr/lib/x86_64-linux-gnu/lib -Wl,
-rpath,/usr/lib/x86_64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf make[3]: Leaving directory '/build/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 19%] Linking C executable mincaverage
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[ 20%] Building C object progs/CMakeFiles/mincgen.dir/ncgentab.c.o
cd /build/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-2.3.00+dfsg/
progs/Proglib -I/build/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-2.3.00+
dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/mincgen.dir/ncgentab.c.o -MF CMakeFiles/mincgen.dir/ncgentab.c.o.
d -o CMakeFiles/mincgen.dir/ncgentab.c.o -c /build/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/ncgentab.c
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cd /build/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-2.3.00+dfsg/
progs/Proglib -I/build/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-2.3.00+
dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/mincgen.dir/ncgenyy.c.o -MF CMakeFiles/mincgen.dir/ncgenyy.c.o.d
-o CMakeFiles/mincgen.dir/ncgenyy.c.o -c /build/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/ncgenyy.c
cd /build/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-2.3.00+dfsg/
progs/Proglib -I/build/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-2.3.00+
dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/minccalc.dir/minccalc/eval.c.o -MF CMakeFiles/minccalc.dir/
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