• Bug#1105136: pbseqlib FTBFS with the nocheck build profile

    From Helmut Grohne@21:1/5 to All on Mon May 12 07:00:01 2025
    Source: pbseqlib
    Version: 5.3.5+dfsg-9
    Severity: serious
    Tags: ftbfs

    pbseqlib fails to build from source when enabling the nocheck build
    profile. The relevant parts of the log are:


    Run-time dependency GTest found: NO (tried pkgconfig and system)
    Looking for a fallback subproject for the dependency gtest

    | ../unittest/meson.build:15:21: ERROR: Automatic wrap-based subproject downloading is disabled
    |
    | A full log can be found at /build/reproducible-path/pbseqlib-5.3.5+dfsg/obj-x86_64-linux-gnu/meson-logs/meson-log.txt
    | cd obj-x86_64-linux-gnu && tail -v -n \+0 meson-logs/meson-log.txt
    | ==> meson-logs/meson-log.txt <==

    Consider reviewing <!nocheck> annotations in debian/control.

    Helmut

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  • From Debian Bug Tracking System@21:1/5 to All on Mon May 12 21:40:01 2025
    Processing control commands:

    tag -1 pending
    Bug #1105136 [src:pbseqlib] pbseqlib FTBFS with the nocheck build profile
    Added tag(s) pending.

    --
    1105136: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1105136
    Debian Bug Tracking System
    Contact owner@bugs.debian.org with problems

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  • From =?UTF-8?B?w4l0aWVubmUgTW9sbGllcg==?@21:1/5 to All on Mon May 12 21:40:01 2025
    Control: tag -1 pending

    Hello,

    Bug #1105136 in pbseqlib reported by you has been fixed in the
    Git repository and is awaiting an upload. You can see the commit
    message below and you can check the diff of the fix at:

    https://salsa.debian.org/med-team/pbseqlib/-/commit/f6ad1f33cbf4acbf26ec12966683fafd0bda6ad8

    ------------------------------------------------------------------------ d/control: unconditionally build-depend on GTest.

    Closes: #1105136 ------------------------------------------------------------------------

    (this message was generated automatically)
    --
    Greetings

    https://bugs.debian.org/1105136

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  • From Debian Bug Tracking System@21:1/5 to All on Mon May 12 22:50:01 2025
    This is a multi-part message in MIME format...

    Your message dated Mon, 12 May 2025 20:44:29 +0000
    with message-id <E1uEa0j-006mU8-HP@fasolo.debian.org>
    and subject line Bug#1105136: fixed in pbseqlib 5.3.5+dfsg-10
    has caused the Debian Bug report #1105136,
    regarding pbseqlib FTBFS with the nocheck build profile
    to be marked as done.

    This means that you claim that the problem has been dealt with.
    If this is not the case it is now your responsibility to reopen the
    Bug report if necessary, and/or fix the problem forthwith.

    (NB: If you are a system administrator and have no idea what this
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    --
    1105136: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1105136
    Debian Bug Tracking System
    Contact owner@bugs.debian.org with problems

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