• cichlid evolution

    From RonO@21:1/5 to All on Sun Oct 1 15:28:30 2023
    https://www.science.org/doi/10.1126/science.ade2833

    https://phys.org/news/2023-09-explosion-fish-biodiversity-due-genetic.html

    Apparently the diversification of cichlids in Lake Victoria occurred
    within a 16,000 year period in the last 20,000 years after a dry period
    when the lake dried up. All the species evolved since then.

    They sequenced over 400 cichlid species.

    Around a 150,000 years ago two different species hybridized and formed a
    mixed population with genetic variation from both species segregating
    within the new hybrid species.

    16,000 years is nothing in terms of population genetics. The Phys Org
    article notes that it took millions of years for the Galapagos finches
    to diversify into less than 20 species. There should be greater differentiation between African and non African human populations, but
    these fish diversified into the amazing number of species in a geologic
    eye blink. They did it by segregating the genetic variation of the two original species into functional nuclear genomes that were better
    adapted to particular environments. These new nuclear genomes did not
    have the full set of genetic variation from the two original species,
    but by chance and selection would have created novel subsets that
    consisted of only some of that original genetic variation. These new
    "species" would themselves hybridize with other populations that
    segregated the original genetic variation into other subsets that were
    better adapted to other specific environments. In this way you could
    recycle the variation and combine subsets to form new combinations that
    would be adapted to new environmental conditions.

    It is pretty amazing that the genetic variation of the two original
    species could be mixed up and recombined into all the novel outcomes
    that have been produced so far.

    Ron Okimoto

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  • From Bob Casanova@21:1/5 to All on Mon Oct 2 08:04:33 2023
    On Sun, 1 Oct 2023 15:28:30 -0500, the following appeared in
    talk.origins, posted by RonO <rokimoto@cox.net>:

    https://www.science.org/doi/10.1126/science.ade2833

    https://phys.org/news/2023-09-explosion-fish-biodiversity-due-genetic.html

    Apparently the diversification of cichlids in Lake Victoria occurred
    within a 16,000 year period in the last 20,000 years after a dry period
    when the lake dried up. All the species evolved since then.

    They sequenced over 400 cichlid species.

    Around a 150,000 years ago two different species hybridized and formed a >mixed population with genetic variation from both species segregating
    within the new hybrid species.

    16,000 years is nothing in terms of population genetics. The Phys Org >article notes that it took millions of years for the Galapagos finches
    to diversify into less than 20 species. There should be greater >differentiation between African and non African human populations, but
    these fish diversified into the amazing number of species in a geologic
    eye blink. They did it by segregating the genetic variation of the two >original species into functional nuclear genomes that were better
    adapted to particular environments. These new nuclear genomes did not
    have the full set of genetic variation from the two original species,
    but by chance and selection would have created novel subsets that
    consisted of only some of that original genetic variation. These new >"species" would themselves hybridize with other populations that
    segregated the original genetic variation into other subsets that were
    better adapted to other specific environments. In this way you could
    recycle the variation and combine subsets to form new combinations that
    would be adapted to new environmental conditions.

    It is pretty amazing that the genetic variation of the two original
    species could be mixed up and recombined into all the novel outcomes
    that have been produced so far.

    It is indeed. But, assuming that cichlids were the *only*
    surviving species of the "drying event", there would have
    been quite a few empty niches to be filled, which I'd think
    would have "supercharged" adaptation and subsequent
    speciation. Correct?

    --

    Bob C.

    "The most exciting phrase to hear in science,
    the one that heralds new discoveries, is not
    'Eureka!' but 'That's funny...'"

    - Isaac Asimov

    --- SoupGate-Win32 v1.05
    * Origin: fsxNet Usenet Gateway (21:1/5)
  • From RonO@21:1/5 to Bob Casanova on Mon Oct 2 17:43:50 2023
    On 10/2/2023 10:04 AM, Bob Casanova wrote:
    On Sun, 1 Oct 2023 15:28:30 -0500, the following appeared in
    talk.origins, posted by RonO <rokimoto@cox.net>:

    https://www.science.org/doi/10.1126/science.ade2833

    https://phys.org/news/2023-09-explosion-fish-biodiversity-due-genetic.html >>
    Apparently the diversification of cichlids in Lake Victoria occurred
    within a 16,000 year period in the last 20,000 years after a dry period
    when the lake dried up. All the species evolved since then.

    They sequenced over 400 cichlid species.

    Around a 150,000 years ago two different species hybridized and formed a
    mixed population with genetic variation from both species segregating
    within the new hybrid species.

    16,000 years is nothing in terms of population genetics. The Phys Org
    article notes that it took millions of years for the Galapagos finches
    to diversify into less than 20 species. There should be greater
    differentiation between African and non African human populations, but
    these fish diversified into the amazing number of species in a geologic
    eye blink. They did it by segregating the genetic variation of the two
    original species into functional nuclear genomes that were better
    adapted to particular environments. These new nuclear genomes did not
    have the full set of genetic variation from the two original species,
    but by chance and selection would have created novel subsets that
    consisted of only some of that original genetic variation. These new
    "species" would themselves hybridize with other populations that
    segregated the original genetic variation into other subsets that were
    better adapted to other specific environments. In this way you could
    recycle the variation and combine subsets to form new combinations that
    would be adapted to new environmental conditions.

    It is pretty amazing that the genetic variation of the two original
    species could be mixed up and recombined into all the novel outcomes
    that have been produced so far.

    It is indeed. But, assuming that cichlids were the *only*
    surviving species of the "drying event", there would have
    been quite a few empty niches to be filled, which I'd think
    would have "supercharged" adaptation and subsequent
    speciation. Correct?


    When the lake filled all the existing habitats formed, so there were
    plenty of new niches to fill. Apparently fish best adapted to the
    available niches settled there and adapted to them, and as the new
    nuclear genomes formed they hybridized with the surrounding populations creating even more diverse subsets of the two original genomes. What
    seems to be glossed over is how a Congo species interbred with a Nile
    species when they are different drainage systems. They do note
    mitochondrial lineage spread across the continental divide. I guess
    fish can be carried by birds or sucked up by cyclones or tornados, but
    the cichlids were able to cross the continental divide, probably more
    than once.

    Ron Okimoto

    --- SoupGate-Win32 v1.05
    * Origin: fsxNet Usenet Gateway (21:1/5)
  • From Bob Casanova@21:1/5 to All on Tue Oct 3 08:15:39 2023
    On Mon, 2 Oct 2023 17:43:50 -0500, the following appeared in
    talk.origins, posted by RonO <rokimoto@cox.net>:

    On 10/2/2023 10:04 AM, Bob Casanova wrote:
    On Sun, 1 Oct 2023 15:28:30 -0500, the following appeared in
    talk.origins, posted by RonO <rokimoto@cox.net>:

    https://www.science.org/doi/10.1126/science.ade2833

    https://phys.org/news/2023-09-explosion-fish-biodiversity-due-genetic.html >>>
    Apparently the diversification of cichlids in Lake Victoria occurred
    within a 16,000 year period in the last 20,000 years after a dry period
    when the lake dried up. All the species evolved since then.

    They sequenced over 400 cichlid species.

    Around a 150,000 years ago two different species hybridized and formed a >>> mixed population with genetic variation from both species segregating
    within the new hybrid species.

    16,000 years is nothing in terms of population genetics. The Phys Org
    article notes that it took millions of years for the Galapagos finches
    to diversify into less than 20 species. There should be greater
    differentiation between African and non African human populations, but
    these fish diversified into the amazing number of species in a geologic
    eye blink. They did it by segregating the genetic variation of the two
    original species into functional nuclear genomes that were better
    adapted to particular environments. These new nuclear genomes did not
    have the full set of genetic variation from the two original species,
    but by chance and selection would have created novel subsets that
    consisted of only some of that original genetic variation. These new
    "species" would themselves hybridize with other populations that
    segregated the original genetic variation into other subsets that were
    better adapted to other specific environments. In this way you could
    recycle the variation and combine subsets to form new combinations that
    would be adapted to new environmental conditions.

    It is pretty amazing that the genetic variation of the two original
    species could be mixed up and recombined into all the novel outcomes
    that have been produced so far.

    It is indeed. But, assuming that cichlids were the *only*
    surviving species of the "drying event", there would have
    been quite a few empty niches to be filled, which I'd think
    would have "supercharged" adaptation and subsequent
    speciation. Correct?


    When the lake filled all the existing habitats formed, so there were
    plenty of new niches to fill. Apparently fish best adapted to the
    available niches settled there and adapted to them, and as the new
    nuclear genomes formed they hybridized with the surrounding populations >creating even more diverse subsets of the two original genomes. What
    seems to be glossed over is how a Congo species interbred with a Nile
    species when they are different drainage systems. They do note
    mitochondrial lineage spread across the continental divide. I guess
    fish can be carried by birds or sucked up by cyclones or tornados, but
    the cichlids were able to cross the continental divide, probably more
    than once.

    Aha! OK, I didn't see the implication, since I wasn't aware
    that the two populations (species?) noted and shown on the
    chart were in different watersheds. Thanks!

    --

    Bob C.

    "The most exciting phrase to hear in science,
    the one that heralds new discoveries, is not
    'Eureka!' but 'That's funny...'"

    - Isaac Asimov

    --- SoupGate-Win32 v1.05
    * Origin: fsxNet Usenet Gateway (21:1/5)